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The igv team is based at uc san diego and the broad institute of mit and harvard Igv.js is an embeddable interactive genome visualization component developed by the integrative genomics viewer (igv) team. This site is focused on the igv desktop application

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Data can be loaded directly from a user’s local file system, or via url from web servers and cloud providers. If you run igv with your own java installation, rosetta may not be required if your version of java runs natively on m1. You can save a file in igv session format, bookmark the page in your browser, or create a web link url that you can share with others.

The igv display of the aligned reads uses color, transparency, and symbolsto highlight some of the information details, as described in the sections below

You can also sort and group the alignments based on various attributes, Apple's rosetta software is required to run the igv macos app that includes java